The detailed information of tRNA gene sequence


Sequence ID>SRA1001963
Genome IDSRR001308.149641
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 217
End posion on genome 141
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agaaaaacac
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACCA
Downstream region at tRNA end position 
aagagagtta
Secondary structure (Cloverleaf model)
>SRA1001963	Ile	GAT
                   c      ACCA aagagagtta
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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