The detailed information of tRNA gene sequence


Sequence ID>SRA1001964
Genome IDSRR001308.150642
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 126
End posion on genome 49
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcctctcttc
tRNA gene sequence 
GTCCCCATCGTCTAGCCTGGCCTAGGACATTGCCCTTTCAAGGCAGTAACACGGGTTCAA
ATCCCGTTGGGGACACCA
Downstream region at tRNA end position 
cacttctcca
Secondary structure (Cloverleaf model)
>SRA1001964	Glu	TTC
                   c      ACCA cacttctcca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     TAAC
                    T + G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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