The detailed information of tRNA gene sequence


Sequence ID>SRA1001969
Genome IDSRR001308.155375
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 109
End posion on genome 182
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaaaagcaat
tRNA gene sequence 
GATTCCGTAGCTCAGCTGGTAGAGCAATACACTTTTAATGTATGGGTCCTGGGTTCGAAT
CCCAGCGGGATCACag
Downstream region at tRNA end position 
gtgccaaacc
Secondary structure (Cloverleaf model)
>SRA1001969	Lys	TTT
                   t      ACag gtgccaaacc
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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