The detailed information of tRNA gene sequence


Sequence ID>SRA1001971
Genome IDSRR001308.156113
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 22
End posion on genome 107
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caccgacacc
tRNA gene sequence 
GCCGGAGTGGTGAAATTGGTAGACGCAGGGGACTCAAAATCCCCCCGCCGCAAGGCGTGC
CGGTTCGATTCCGGCCTCCGGCACCA
Downstream region at tRNA end position 
gaaaaaaccc
Secondary structure (Cloverleaf model)
>SRA1001971	Leu	CAA
                   c      ACCA gaaaaaaccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CCGCCGCAAGGCGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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