The detailed information of tRNA gene sequence


Sequence ID>SRA1001981
Genome IDSRR001308.164474
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 95
End posion on genome 19
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttgcgagcat
tRNA gene sequence 
GGGCCGGTAGCTCAGTTGGTTAGAGCACACGCTTGATAAGCGTGGGGTCGGAGGTTCAAA
TCCTCCTCGGCCCACCA
Downstream region at tRNA end position 
tgtttcagat
Secondary structure (Cloverleaf model)
>SRA1001981	Ile	GAT
                   t      ACCA tgtttcagat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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