The detailed information of tRNA gene sequence


Sequence ID>SRA1001986
Genome IDSRR001308.167363
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 225
End posion on genome 141
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ggagttttgg
tRNA gene sequence
GCGGGCGTGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTATCGCAAGATGTGGG
GGTTCGAGTCCCTTCGCCCGCACCA
Downstream region at tRNA end position
gtccaccgac
Secondary structure (Cloverleaf model)
>SRA1001986	Leu	TAG
                   g      ACCA gtccaccgac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCGCAAGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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