The detailed information of tRNA gene sequence


Sequence ID>SRA1001990
Genome IDSRR001308.168611
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 153
End posion on genome 228
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccccaccact
tRNA gene sequence 
GCTCCCATCGTCTAGAGGCCTAGGACGCCGCCCTCTCAAGGCAGCAACACGGGTTCGAAT
CCCGTTGGGAGTACCA
Downstream region at tRNA end position 
atcatgaaaa
Secondary structure (Cloverleaf model)
>SRA1001990	Glu	CTC
                   t      ACCA atcatgaaaa
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     CAAC
                    C - G
                    C   A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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