The detailed information of tRNA gene sequence


Sequence ID>SRA1001992
Genome IDSRR001308.169839
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 197
End posion on genome 122
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acctttgctt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCGACAATGGCATTGTCGAGGTCGTCGGTTCGAAG
CCGACTGGTTCCACTA
Downstream region at tRNA end position 
caagacaacg
Secondary structure (Cloverleaf model)
>SRA1001992	Ala	GGC
                   t      ACTA caagacaacg
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     C - G
                     A - T          G A
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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