The detailed information of tRNA gene sequence


Sequence ID>SRA1002007
Genome IDSRR001308.181383
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 87
End posion on genome 169
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
caaaacactc
tRNA gene sequence 
GCTCGGGTGGTGGAATTGGTAGACACGTACGCTTGAGGTGCGTATGCTTTACGGCGTGGG
GGTTCAAGTCCCCCCTCGAGTACat
Downstream region at tRNA end position 
tcccttcttt
Secondary structure (Cloverleaf model)
>SRA1002007	Leu	GAG
                   c      ACat tcccttcttt
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G + T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTTTACGGCGT
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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