The detailed information of tRNA gene sequence


Sequence ID>SRA1002009
Genome IDSRR001308.183526
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccaggtttt
tRNA gene sequence 
GACCCTATCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACCGGGGTTCGAAT
CCCCGTAGGGTCGCCA
Downstream region at tRNA end position 
agttttgtgg
Secondary structure (Cloverleaf model)
>SRA1002009	Glu	TTC
                   t      GCCA agttttgtgg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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