The detailed information of tRNA gene sequence


Sequence ID>SRA1002010
Genome IDSRR001308.183526
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 159
End posion on genome 235
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acaccgacgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttcacacaag
Secondary structure (Cloverleaf model)
>SRA1002010	Asp	GTC
                   c      GCCA ttcacacaag
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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