The detailed information of tRNA gene sequence


Sequence ID>SRA1002013
Genome IDSRR001308.184659
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 73
End posion on genome 147
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatattgcaa
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCACCTGACTCATAATCAGGGGGTCCCTGGTTCAAG
CCCAGGTGGGCCCACtt
Downstream region at tRNA end position 
tactgtaaag
Secondary structure (Cloverleaf model)
>SRA1002013	Met	CAT
                   a      ACtt tactgtaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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