The detailed information of tRNA gene sequence


Sequence ID>SRA1002016
Genome IDSRR001308.185054
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 89
End posion on genome 160
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position
tactcccaaa
tRNA gene sequence
GCTTTGGTAGCTCAGAGGTAGAGCAGTAGCCTGAAAAGCTATGTGTCGAAGGTTCGAGTC
CTTTCCAAGGCGgcg
Downstream region at tRNA end position
gggcgtttgt
Secondary structure (Cloverleaf model)
>SRA1002016	Phe	GAA
                   a      Ggcg gggcgtttgt
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A
                     G - C
                     G - C          T G
                    T     T T T C C     A
        G A        A      + | | | |     G
      A     C T C G       G A A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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