The detailed information of tRNA gene sequence


Sequence ID>SRA1002018
Genome IDSRR001308.185855
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 301
End posion on genome 209
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCCCGAGTGGTGAAACTGGTAGACACATCGGACTTAAAATCCGCCGCTTTCCGTAAAAGG
GGCGTGCCGGTTCAATTCCGGCCTCGGGCACCA
Downstream region at tRNA end position 
ttagtatgtt
Secondary structure (Cloverleaf model)
>SRA1002018	Leu	TAA
                   t      ACCA ttagtatgtt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T T
                    T     C G G C C     A
      C A A        G      | | | | |     A
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTTTCCGTAAAAGGGGCGT
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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