The detailed information of tRNA gene sequence


Sequence ID>SRA1002020
Genome IDSRR001308.188833
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 100
End posion on genome 175
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gcgcttcgtt
tRNA gene sequence 
GGCCCGGTAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCCCAGGCCACCA
Downstream region at tRNA end position 
cctatttaag
Secondary structure (Cloverleaf model)
>SRA1002020	Phe	GAA
                   t      ACCA cctatttaag
                     G - C
                     G - C
                     C - G
                     C - G
                     C   A
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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