The detailed information of tRNA gene sequence


Sequence ID>SRA1002025
Genome IDSRR001308.192682
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 45
End posion on genome 120
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
ggatacaatc
tRNA gene sequence
AGATCCGTAGCTCAGCCTGGTTAGAGCACTACACTGATAATGTAGGGGTCTCCAGTTCAA
ATCTGGACGGGTCTACtt
Downstream region at tRNA end position
ttatgaagcg
Secondary structure (Cloverleaf model)
>SRA1002025	Ile	GAT
                   c      ACtt ttatgaagcg
                     A - T
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     A G G T C     A
    C C G A        A      | | | | |     A
  T         C T C G       T C C A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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