The detailed information of tRNA gene sequence


Sequence ID>SRA1002026
Genome IDSRR001308.192955
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 134
End posion on genome 58
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
cttttaaaat
tRNA gene sequence
TCCGACATAGCTCAGCAGGTTAGAGCGGCTGCCTTGTAAGCAGTAGGCCACAAGTTCGAT
TCTTGTTGTCGGATCAA
Downstream region at tRNA end position
acgacttgta
Secondary structure (Cloverleaf model)
>SRA1002026	Thr	TGT
                   t      TCAA acgacttgta
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     T G T T C     A
      C G A        A      | | | | |     G
    A       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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