The detailed information of tRNA gene sequence


Sequence ID>SRA1002029
Genome IDSRR001308.194836
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 132
End posion on genome 58
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggcgttcctt
tRNA gene sequence 
GGGCCTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCAGAGGTTCAAC
TCCTCTCAGGCCCACtc
Downstream region at tRNA end position 
ccggtacgtc
Secondary structure (Cloverleaf model)
>SRA1002029	Ile	GAT
                   t      ACtc ccggtacgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     T C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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