The detailed information of tRNA gene sequence


Sequence ID>SRA1002035
Genome IDSRR001308.197923
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 80
End posion on genome 156
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tccgccgcgc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGCTAGAGCGCCTCCCTTACAAGGAGGATGTCGGGGGTTCGAC
TCCCTCCGGGCGCACCA
Downstream region at tRNA end position 
ccgcgcgtcg
Secondary structure (Cloverleaf model)
>SRA1002035	Val	TAC
                   c      ACCA ccgcgcgtcg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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