The detailed information of tRNA gene sequence


Sequence ID>SRA1002037
Genome IDSRR001308.199060
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 212
End posion on genome 136
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcgttatcga
tRNA gene sequence 
GGGGCATTAGCTCAGCTGGTTAGAGCGCCTGCTTTGCAAGCAGGAGGTCGTCGGTTCGAC
TCCGACATGCTCCACCA
Downstream region at tRNA end position 
attttcgtag
Secondary structure (Cloverleaf model)
>SRA1002037	Ala	TGC
                   a      ACCA attttcgtag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T C
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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