The detailed information of tRNA gene sequence


Sequence ID>SRA1002042
Genome IDSRR001308.204531
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 98
End posion on genome 182
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gctcgtcgcc
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGTCAAAGGGATCAGACTGTAAATCTGACGGCTCTGCCTTCGAA
GGTTCGAATCCTTCCCCCTCCACCA
Downstream region at tRNA end position 
caannnnnnn
Secondary structure (Cloverleaf model)
>SRA1002042	Tyr	GTA
                   c      ACCA caannnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGGCTCTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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