The detailed information of tRNA gene sequence


Sequence ID>SRA1002043
Genome IDSRR001308.206186
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 182
End posion on genome 92
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgtccctgc
tRNA gene sequence 
GGAGGGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTAACAGCCC
ACCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gacagacagt
Secondary structure (Cloverleaf model)
>SRA1002043	Ser	GGA
                   c      GCCA gacagacagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTAACAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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