The detailed information of tRNA gene sequence


Sequence ID>SRA1002044
Genome IDSRR001308.208048
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 116
End posion on genome 41
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctctttttgt
tRNA gene sequence 
GGTCGATTCGTCTAGGGGTCTAGGACACCGCCCTTTCACGGCGGCGACACGGGTTCAAAT
CCCGTATCGACTACCA
Downstream region at tRNA end position 
tctttttcgg
Secondary structure (Cloverleaf model)
>SRA1002044	Glu	TTC
                   t      ACCA tctttttcgg
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK