The detailed information of tRNA gene sequence


Sequence ID>SRA1002045
Genome IDSRR001308.208646
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaagcaacaa
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACGA
Downstream region at tRNA end position 
aaaagtaggg
Secondary structure (Cloverleaf model)
>SRA1002045	Ile	GAT
                   a      ACGA aaaagtaggg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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