The detailed information of tRNA gene sequence


Sequence ID>SRA1002046
Genome IDSRR001308.208646
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 103
End posion on genome 179
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgaaaaagta
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGAA
TCCGTTATTCTCCACTA
Downstream region at tRNA end position 
acgttagtca
Secondary structure (Cloverleaf model)
>SRA1002046	Ala	TGC
                   a      ACTA acgttagtca
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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