The detailed information of tRNA gene sequence


Sequence ID>SRA1002047
Genome IDSRR001308.209204
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 185
End posion on genome 274
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
cggcccgttc
tRNA gene sequence
GGAGAGATGCCTGAGAGGCCGAAAGGAACAGTTTGCTAAACTGTCGTACTGGCAACGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position
acacttgaaa
Secondary structure (Cloverleaf model)
>SRA1002047	Ser	GCT
                   c      GCAA acacttgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACTGGCAACGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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