The detailed information of tRNA gene sequence


Sequence ID>SRA1002050
Genome IDSRR001308.211560
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 33
End posion on genome 118
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
gttcttcgcc
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position
gcgaatgggt
Secondary structure (Cloverleaf model)
>SRA1002050	Tyr	GTA
                   c      ACCA gcgaatgggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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