The detailed information of tRNA gene sequence


Sequence ID>SRA1002055
Genome IDSRR001308.215553
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 164
End posion on genome 250
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ccagatggtc
tRNA gene sequence 
GCGGTCGTGGCGGAATTGGTAGACGCGCAACGTTGAGGTCGTTGTGGGCGAAAGCCCGTG
GAAGTTCGAGTCTTCTCGACCGCACCA
Downstream region at tRNA end position 
ttttttgagt
Secondary structure (Cloverleaf model)
>SRA1002055	Leu	GAG
                   c      ACCA ttttttgagt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGCGAAAGCCCGT
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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