The detailed information of tRNA gene sequence


Sequence ID>SRA1002056
Genome IDSRR001308.216395
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 117
End posion on genome 192
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gtagttttaa
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCAGCGTTCGCAATGCTGAGGTCAGGGGTTCGATC
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
aattgagggc
Secondary structure (Cloverleaf model)
>SRA1002056	Ala	CGC
                   a      ACCA aattgagggc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK