The detailed information of tRNA gene sequence


Sequence ID>SRA1002057
Genome IDSRR001308.216906
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 200
End posion on genome 125
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
ctctacggat
tRNA gene sequence
GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCGTGTTCGAGT
CACGCACGACCCACCA
Downstream region at tRNA end position
cgcggccggc
Secondary structure (Cloverleaf model)
>SRA1002057	Lys	TTT
                   t      ACCA cgcggccggc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     C G C A C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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