The detailed information of tRNA gene sequence


Sequence ID>SRA1002062
Genome IDSRR001308.218790
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 249
End posion on genome 173
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcgcccggt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCACTGCGTTCGGGACGCAGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
aaccgcatct
Secondary structure (Cloverleaf model)
>SRA1002062	Pro	CGG
                   t      ACCA aaccgcatct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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