The detailed information of tRNA gene sequence


Sequence ID>SRA1002066
Genome IDSRR001308.220477
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cctgacctat
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTATTGGTTTCCGAAGCCAAGGGTCACAGGTTCGAC
TCCTGTCGGGCGCGCCA
Downstream region at tRNA end position 
cgnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002066	Arg	CCG
                   t      GCCA cgnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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