The detailed information of tRNA gene sequence


Sequence ID>SRA1002068
Genome IDSRR001308.222556
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 63
End posion on genome 136
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcgtttcat
tRNA gene sequence 
AGGGCAGTAGCTCCAACGGTAGAGCAGCGGTCTCCAAATCCGCGTGTTGGGGGTTCAAAT
CCCTCCTGCCCTGCac
Downstream region at tRNA end position 
tttctcgcgt
Secondary structure (Cloverleaf model)
>SRA1002068	Trp	CCA
                   t      GCac tttctcgcgt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T   T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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