The detailed information of tRNA gene sequence


Sequence ID>SRA1002078
Genome IDSRR001308.230074
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 23
End posion on genome 99
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cagccgcact
tRNA gene sequence 
GGGTCTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGCCGATGGTTCGAG
TCCATCTAGACCCACCA
Downstream region at tRNA end position 
gtgcattgac
Secondary structure (Cloverleaf model)
>SRA1002078	Ile	GAT
                   t      ACCA gtgcattgac
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          T G
                    T     C T A C C     A
      G G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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