The detailed information of tRNA gene sequence


Sequence ID>SRA1002079
Genome IDSRR001308.230074
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 130
End posion on genome 205
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
ctggactcaa
tRNA gene sequence
GGGGCCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGACTGGCTCCACCA
Downstream region at tRNA end position
gggcgcagac
Secondary structure (Cloverleaf model)
>SRA1002079	Ala	TGC
                   a      ACCA gggcgcagac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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