The detailed information of tRNA gene sequence


Sequence ID>SRA1002081
Genome IDSRR001308.232502
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 43
End posion on genome 119
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cgacacatat
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCACCAGATTGTGGATCTGGGGGTCCCCCGTTCGAG
CCGGGGAGGCGGTACCA
Downstream region at tRNA end position 
aaattccttt
Secondary structure (Cloverleaf model)
>SRA1002081	His	GTG
                   t      ACCA aaattccttt
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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