The detailed information of tRNA gene sequence


Sequence ID>SRA1002082
Genome IDSRR001308.232504
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 7
End posion on genome 82
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnncaactt
tRNA gene sequence 
GCTCACGTAGCTCAGTCGGTAGAGCACCTCCTTGGTAAGGAGGAGGTCGAAGGTTCGATT
CCTTTCGTGAGCACCA
Downstream region at tRNA end position 
ctattcactg
Secondary structure (Cloverleaf model)
>SRA1002082	Thr	GGT
                   t      ACCA ctattcactg
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T T T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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