The detailed information of tRNA gene sequence


Sequence ID>SRA1002084
Genome IDSRR001308.232727
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 249
End posion on genome 173
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgaaaaagta
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGAA
TCCGTTATTCTCCACTA
Downstream region at tRNA end position 
acgttagtca
Secondary structure (Cloverleaf model)
>SRA1002084	Ala	TGC
                   a      ACTA acgttagtca
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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