The detailed information of tRNA gene sequence


Sequence ID>SRA1002085
Genome IDSRR001308.233476
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 221
End posion on genome 148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcggcctcg
tRNA gene sequence 
GGGCCCTTAGCTCAATGGTTAGAGCTGGCTGCTCATACCAGCTTGGTTGCGGGTTCGAGT
CCTGCAGGGCCCACac
Downstream region at tRNA end position 
tttcgcaaag
Secondary structure (Cloverleaf model)
>SRA1002085	Met	CAT
                   g      ACac tttcgcaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     TGGTT
                    G + T
                    G - C
                    C - G
                    T - A
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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