The detailed information of tRNA gene sequence


Sequence ID>SRA1002086
Genome IDSRR001308.234349
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 141
End posion on genome 217
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttggctcttc
tRNA gene sequence 
AGGCGCGTAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAG
TCCAATCGCGCCTACCA
Downstream region at tRNA end position 
aatccggtag
Secondary structure (Cloverleaf model)
>SRA1002086	Val	GAC
                   c      ACCA aatccggtag
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T A A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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