The detailed information of tRNA gene sequence


Sequence ID>SRA1002088
Genome IDSRR001308.235334
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 110
End posion on genome 183
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position
actgaattaa
tRNA gene sequence
GCGGAAGTAGCTCATTTGGTAGAGCGATAGCCTTCCAAGCTATAGGTGGCGGGTTCGAGC
CCCGTCTTCCGCTCgg
Downstream region at tRNA end position
cttattaaag
Secondary structure (Cloverleaf model)
>SRA1002088	Gly	TCC
                   a      TCgg cttattaaag
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T T A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTG
                    A - T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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