The detailed information of tRNA gene sequence


Sequence ID>SRA1002091
Genome IDSRR001308.235650
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 213
End posion on genome 137
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccggccacgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
agcattgttg
Secondary structure (Cloverleaf model)
>SRA1002091	Asp	GTC
                   c      GCCA agcattgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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