The detailed information of tRNA gene sequence


Sequence ID>SRA1002092
Genome IDSRR001308.236176
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 51
End posion on genome 127
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatatctttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
accttctgtc
Secondary structure (Cloverleaf model)
>SRA1002092	Met	CAT
                   t      ACCA accttctgtc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK