The detailed information of tRNA gene sequence


Sequence ID>SRA1002096
Genome IDSRR001308.238267
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 244
End posion on genome 170
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actgaagaat
tRNA gene sequence 
GGGGTGGTAGTTAAGTTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAG
TCCCGTCCACCCCGCac
Downstream region at tRNA end position 
tacccaaggc
Secondary structure (Cloverleaf model)
>SRA1002096	Asp	GTC
                   t      GCac tacccaaggc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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