The detailed information of tRNA gene sequence


Sequence ID>SRA1002097
Genome IDSRR001308.238589
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 230
End posion on genome 156
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
attgataaat
tRNA gene sequence 
TCTTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCAAG
TCCAGCAGGGAGAGCag
Downstream region at tRNA end position 
ataatcaagc
Secondary structure (Cloverleaf model)
>SRA1002097	Asn	GTT
                   t      GCag ataatcaagc
                     T - A
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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