The detailed information of tRNA gene sequence


Sequence ID>SRA1002098
Genome IDSRR001308.239254
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 179
End posion on genome 253
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
caaaagatac
tRNA gene sequence 
CGGGACGTAGCGCAGGGGTAGCGCGCACCTTTGGGGTGGGTGAGGCCGGAGGTTCGATTC
CTCTCGTCCCGACCA
Downstream region at tRNA end position 
gttaaaacta
Secondary structure (Cloverleaf model)
>SRA1002098	Pro	GGG
                   c      ACCA gttaaaacta
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C T C C     A
        G A        A      + | | | |     G
      G     C G C G       G G A G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    C - G
                    T + G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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