The detailed information of tRNA gene sequence


Sequence ID>SRA1002102
Genome IDSRR001308.242016
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 141
End posion on genome 63
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgcagcttgT
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGAGTTCGAA
TCCCGCCGCCCCGAACC
Downstream region at tRNA end position 
Aaaagaaaca
Secondary structure (Cloverleaf model)
>SRA1002102	Pro	GGG
                   T      AACC Aaaagaaaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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