The detailed information of tRNA gene sequence


Sequence ID>SRA1002104
Genome IDSRR001308.243216
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 236
End posion on genome 160
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaattttta
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCGCTCCGCTCATAACGGAGTGGTCGCAGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cctgatattt
Secondary structure (Cloverleaf model)
>SRA1002104	Met	CAT
                   a      ACCA cctgatattt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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