The detailed information of tRNA gene sequence


Sequence ID>SRA1002109
Genome IDSRR001308.246098
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 147
End posion on genome 222
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaaactaag
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
gttttgaatc
Secondary structure (Cloverleaf model)
>SRA1002109	Ala	TGC
                   g      ACCA gttttgaatc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK