The detailed information of tRNA gene sequence


Sequence ID>SRA1002114
Genome IDSRR001308.251119
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 249
End posion on genome 175
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aagcggcctc
tRNA gene sequence 
GCGGGAATAACTCAGTGGTAGAGTGCAACCTTGCCAAGGTTGAAGTCGTGGGTTCGAATC
CCATTTCCCGCTCCC
Downstream region at tRNA end position 
agatttgctt
Secondary structure (Cloverleaf model)
>SRA1002114	Gly	GCC
                   c      TCCC agatttgctt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T A C C C     A
        G A        A      + | | | |     G
      T     C T C A       G T G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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